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I am now leading my own Bioinformatics
research group at Boku University, Vienna, combining analytical and
laboratory work.
Meeting Invitation
We are organizing an Intl. Workshop on
Probabilistic Modelling in Computational Biology
in affiliation with ISMB/ECCB 2007 in Vienna this year and much look
forward to seeing you there!
Work with the Inference Group
- D. P. Kreil and D. J. C. MacKay, Reproducibility Assessment of
Independent Component Analysis of Expression Ratios from DNA
microarrays
- S. A. Saidi, C. M. Holland, D. P. Kreil, D. J. C. MacKay,
D. S. Charnock-Jones, C. G. Print, and S. K. Smith,
Independent Component Analysis of Microarray Data in the Study
of Endometrial Cancer
Other papers
This list is currently not maitained. For new papers, please see the
PubMed repository. Here is a link
to my papers and a link to papers of members of my group.
- D. P. Kreil, R. R. Russell, and
S. Russell, Microarray Oligonucleotide-probes
- Published in print by
Methods
in Enzymology (2006), 410(1), pp. 73-98.
(full text not available online)
- Preprint on request.
- Online Supplement, Revision 16 Aug, 2006. [ 151kB
pdf ]
- T. Kanno, B. Huettel, M. F. Mette, W. Aufsatz, E. Jaligot,
L. Daxinger, D. P. Kreil, M. Matzke, and A. J. Matzke,
Atypical RNA polymerase subunits required for RNA-directed
DNA methylation
- Published in print by
Nature Genetics (2005),
37, pp. 761-765.
- Preprint on request.
- R. P. Auburn, D. P. Kreil, L. A. Meadows, B. Fischer,
S. Sevillano Matilla, and S. Russell, Robotic spotting of
cDNA and oligonucleotide microarrays
- D. P. Kreil and R. R. Russell, There is no silver
bullet – a guide to low-level data transforms and
normalisation methods for microarray data
- A. Woolfson, J. Stebbing, B. Tom, K. Stoner, W. Gilks,
D. P. Kreil, S. Mulligan, L. Belov, J. Chrisp,
W. Errington, A. Wildfire, W. Erber, M. Bower, B. Gazzard,
R. Christopherson, and M. Scott, Conservation of unique
cell surface CD antigen mosaics in HIV-1 infected
individuals
- Published in print by Blood (2005), 106(3),
pp. 1003-1007.
- Preprint on request.
- R. P. Auburn, D. P. Kreil, L. A. Meadows, B. Fischer,
S. Sevillano Matilla, and S. Russell, Robotic
spotting of cDNA and oligonucleotide microarrays
- Published in print by Trends in Biotechnology
(2005), 23(7), pp. 374-379.
- Preprint
[132kB pdf]
- Supplement
[49kB pdf]
- D. P. Kreil, N. A. Karp, and K. S. Lilley
(2004), DNA microarray normalization methods can remove
bias from differential protein expression calls in 2-D
difference gel electrophoresis
- N. A. Karp, D. P. Kreil, and K. S. Lilley (2004)
Determining a significant change in protein expression with
DeCyder for pair-wise comparisons using 2-D difference gel
electrophoresis
- T. Kanno, M. F. Mette, D. P. Kreil, W. Aufsatz, M. Matzke,
and A. J. Matzke, Involvement of Putative SNF2 Chromatin
Remodeling Protein DRD1 in RNA-Directed DNA Methylation
- D. P. Kreil and C. A. Ouzounis, Comparison of sequence
masking algorithms and the detection of biased protein sequence
regions
- D. P. Kreil and C. A. Ouzounis (2001), Identification of
thermophilic species by the amino acid compositions deduced from
their genomes, Nucleic
Acids Research 29(7),
1608-1615.
(free reprint / full text access)
- D. P. Kreil and G. Kreil (2000), Asparagine repeats are rare
in mammalian proteins,
Trends Biochem. Sciences
25(6), 270-271.
(reprint via
ScienceDirect, or drop
me a line)
- V. J. Promponas, A. J. Enright, S. Tsoka, D. P. Kreil,
C. Leroy, S. Hamodrakas, C. Sander, and C. A. Ouzounis (2000),
CAST: an iterative algorithm for the Complexity
Analysis of Sequence Tracts,
Bioinformatics 16(10),
915-922.
(free reprint / full text access)
- D. P. Kreil and T. Etzold (1999), DATABANKS - a
catalogue database of molecular biological databanks,
Trends Biochem. Sciences
24(4), 155-157.
(reprint via
ScienceDirect, or drop
me a line)
Books
- M. Matzke, T. Kanno, B. Hüttel, E. Jaligot, M. F. Mette,
D. P. Kreil, L. Daxinger, P. Rovina, W. Aufsatz, and
A. J. M. Matzke (2005), RNA-directed DNA methylation in